Link: University of Iowa

Department of Biochemistry 2020 Publications

Department of Biochemistry 2020 Publications since April 30, 2020

  • Tiwari, M. Lopez-Redondo, L. Miguel-Romero, et al., The SrrAB two-component system regulates Staphylococcus aureuspathogenicity through redox sensitive cysteines, PNAS (2020), https://doi.org/10.1073/pnas.1921307117
  • Zhang, H. T. Rube, C.A. Vakulskas, et al., Systematic in vitro profiling of off-target affinity, cleavagre and efficiency for CRISPR enzymes, Nucleic Acids Research (2020), https://doi.org/10.1093/nar/gkaa231
  • Pufall, A.M. Wilson, An idea to explore: A collaboration and cross training in an extended classroom- based undergraduate research experience between primarily undergraduate and research-intensive institutions, Biochemistry and Molecular Biology Education (2020), https://doi.org/10.1002/bmb.21340
  • C. Sanchez, L. Zhang, S. Evoli, et al., The molecular basis of specific DNA binding by the BRG1 AT-hook and bromodomain, BBA – Gene Regulatory Mechanisms (2018), https://doi.org/10.1016/j.bbagrm.2020.194566
  • Skuodas, A. Clemons, M. Hayes, et al., The ABCF gene family facilitates disaggregation during animal development, Molecular Biology of the Cell (2020), https://www.molbiolcell.org/doi/10.1091/mbc.E19-08-0443
  • K. Shetty, R. Walzem, B. Davies, A novel NanoBiT-based assay monitors the interaction between lipoprotein lipase and GPIHBP1 in real time, Journal of Lipid Research (2020), https://www.jlr.org/content/61/4/546.short
  • Qiao, S.K. Shetty, K.M. Spitler, et al., Obesity Reduces Maternal Blood Triglyceride Concentrations by Reducing Angiopoietin-like Protein 4 Expression in Mice, Diabetes (2020), https://doi.org/10.2337/db19-1181
  • Johnson, M.G. Flores, J. Rosa, et al., The High Content of Fructose in Human Semen Competitively Inhibits Broad and Potent Antivirals That Target High-Mannose Glycans, Journal of Virology (2020), https://jvi.asm.org/content/94/9/e01749-19
  • DeMali, A. Salvi, J. Bays, Mechanisms Linking Mechanotransduction and Cell Metabolism, The FASEB Journal (2020), https://doi.org/10.1096/fasebj.2020.34.s1.00150
  • H. Elcock, Challenges to the Creation of Dynamic Structural Models of Intracellular Systems,Biophysical Journal (2020), https://doi.org/10.1016/j.bpj.2019.11.2033
  • Duan, N. Green, T.L. Tootle, P.K. Geyer, Nuclear architecture as an intrinsic regulator of Drosophila female germline stem cell maintenance, Current Opinion in Insect Science (2020), https://doi.org/10.1016/j.cois.2019.11.007
  • Duan, S.C. Kitzman, P.K. Geyer, Survival of Drosophila germline stem cells requires the chromatin binding protein Barrier-to-autointegration factor, Development (2020), https://dev.biologists.org/content/early/2020/04/23/dev.186171
  • Li, C.B. Ball, G. Collins, et al., Human cytomegalovirus IE2 drives transcription initiation from a select subset of late infection viral promoters by host RNA polymerase II, PLoS pathogens (2020), https://doi.org/10.1371/journal.ppat.1008402
  • M. Kilpatrick, R.W. Mahling, M.A. Shea, Energetics of Calmodulin Recognition of a Skeletal Muscle Ryanodine Receptor Site, Biophysical Journal (2020), https://doi.org/10.1016/j.bpj.2019.11.1545
  • Stefanovie, S. Hengel, J. Mlcouskova, et al., DSS1 interacts with and stimulates RAD52 to promote the repair of DSBs, Nucleic Acids Research (2020), https://doi.org/10.1093/nar/gkz1052
  • Malacaria, M. Honda, A Franchirro, M. Spies, P. Pichierri, Physiological and Pathological Roles of RAD52 at DNA Replication Forks, Cancers (2020), https://doi.org/10.3390/cancers12020402
  • Honda, E. Paintsil, M. Spies, RAD52 DNA Repair Protein is a Gatekeeper that Protects DNA Replication Forks by Regression by Fork Reversal Motors, Biophysical Journal (2020), https://doi.org/10.1016/j.bpj.2019.11.988
  • Troitskaia, B. Stekas, M. Spies, Y.R. Chemla, Sequence-Dependent Pausing of a DNA Repair Helicase, Biophysical Journal (2020), https://doi.org/10.1016/j.bpj.2019.11.2144
  • Subramanyam, M. Spies, RAD51 discrimination between single-and double-strand DNA: a matter of flexibility and enthalpy, The EMBO Journal (2020), https://doi.org/10.15252/embj.2020104547
  • Earle, T.J. Kirby, G.R. Fedorchak, et al., Mutant lamins cause nuclear envelope rupture and DNA damage in skeletal muscle cells, Nature Materials (2020), https://doi.org/10.1038/s41563-019-0563-5
  • M. Weaver, L.M. Cortez, T.H. Khoang, et al., Visualizing Rev1 Catalyze Protein-template DNA Synthesis, bioRxiv (2020), https://doi.org/10.1101/2020.04.10.036236
  • M. Ripley, M.S. Gildenberg, M.T. Washington, Control of DNA Damage Bypass by Ubiquitylation of PCNA, Genes (2020), https://doi.org/10.3390/genes11020138
  • Nakamori, G. Panigrahi, S. Lanni, et al., A slipped-CAG DNA-binding small molecule induces trinucleotide-repeat contractions in vivo, Nature Genetics (2020), https://doi.org/10.1038/s41588-019-0575-8
  • Gilmour, B.C., Gudmundsrud, R., Frank, J., Hov, A., Hindkjær Lautrup, S., Aman, Y., Røsjø, H., Brenner, C., Ziegler, M., Tysnes, O.B., Tzoulis, C., Omland, T., Søraas, A., Holmøy, T., Bergersen, L.H., Storm-Mathisen, J., Nilsen, H., Evandro F Fang, E.F., “Targeting NAD+in Translational Research to Relieve Diseases and Conditions of Metabolic Stress and Ageing,” Mechanisms of Ageing and Development186, 2020, DOI:10.1016/j.mad.2020.111208
  • Fluharty, N.T. & Brenner, C., “Fat Mobilization Without Weight Loss is a Potentially Rapid Response to Nicotinamide Riboside in Obese People: It’s Time to Test with Exercise, American Journal of Clinical Nutrition, in press, 2020.
  • Heer, C.D. & Brenner, C., “Letting off Electrons to Cope with Metabolic Stress,” Nature Metabolism, in press, 2020.
  • Matasic, D.S., Yoon, J-Y., Mehdi, H., McLendon, J.M., Schmidt, M.S., Greiner, A.M., Quinones, P., Morgan, G.M., Boudreau, R., Irani, K., Brenner, C. & London, B., “Modulation of the Cardiac Sodium Channel Nav1.5 Peak and Late Currents by NAD+Precursors,” Journal of Molecular and Cellular Cardiology, v. 141, pp. 70-81, https://doi.org/10.1016/j.yjmcc.2020.01.013
  • Parker, R., Schmidt, M.S., Cain, O., Gunson, B., & Brenner, C., “The NAD+Metabolome is Functionally Depressed in Patients Undergoing Liver Transplantation for Alcohol-related Liver Disease,” Hepatology Communications, in press, 2020. https://doi.org/10.1101/2020.03.28.013581
  • Gerasimenko, M., Cherepanov, S., Furuhara, K., Lopatina, O., Salmina, A., Shabalova, A., Tsuji, C., Yokoyama, S., Ishihara, K., Brenner, C., & Higashida, H., “Nicotinamide Riboside Supplementation Corrects the Deficits in Oxytocin, Sociability and Anxiety of CD157 Mutants in a Mouse Model of Autism Spectrum Disorder,” Scientific Reports, in press, 2020
  • Pirinen, E., Auranen, M., Khan, N., Brilhante, V., Urho, N., Pessia, A., Hakkarainen, A., Kuula, J., Heinonen, U., Schmidt, M.S., Haimilahti, K., Piirilä, P., Lundbom, N., Taskinen, M.R., Brenner, C., Velagapudi, V., Pietiläinen, K., Suomalainen, A., “Niacin Improves Systemic NAD+and Performance in Mitochondrial Myopathy,” Cell Metabolism, in press, 2020, https://doi.org/10.1016/j.cmet.2020.04.008
  • Levine, D.C., Hong, H., Ramsey, K.M., Affinati, A.H., Schmidt, M.S., Cedernaes, J., Omura, C., Lee, C., Brenner, C., Peek, C.B. & Bass, J., “NAD Controls Circadian Reprogramming Through PER2 Nuclear Translocation,” Molecular Cell, in press, 2020, https://doi.org/10.1016/j.molcel.2020.04.010

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